Install SMOKE as described in Section 12.3, “Installing SMOKE”. You may receive an error message indicating that the Assigns file could not be sourced when you run the smoke_install.csh script.

The $SMK_HOME/scripts/setup_edss script sets the $EDSS_OS environment variable based on the results of the uname command. The $SMK_HOME/scripts/platform uses $EDSS_OS to determine the appropriate compiler command and options for your system. The platform script has compiler options for several UNIX systems and you will either need to review these settings for your compiler or add settings if your system is not included.

Download the I/O API library version 3.0 from the I/O API home page and compile with Makeinclude.Linux2_x86pg. The I/O API can be installed in $SMK_HOME/subsys/ioapi or you can place symbolic links to the libioapi.a library file and datshift utility program in the $SMK_HOME/subsys/ioapi/Linux2_x86pg/ directory.

Create the directory $SMK_HOME/subsys/ioapi_includes/ and then copy the *.EXT files from the fixed_src directory of your I/O API installation to this new directory.

Note: If the user wants to see interactive screen outputs while running SMOKE, follow these steps; 1) Add IOAPIDEFS = -DIOAPI_STDOUT to Makefile and 2) Add DEFINEFLAGS = IOAPI__DEFS $(ARCHFLAGS) $(PARFLAGS) to the Makefile.nocpl.sed for a proper IOAPI compilation for the SMOKE model.

Note: If there are any error messages during compilation regarding CONST3.EXT, go to the fixed_src directory, edit CONST3.EXT and delete the second & at the end of line 42.

Collect or create the NetCDF library version 3.6.1 for your platform and create a symbolic link to the libnetcdf.a library file in the $SMK_HOME/subsys/netcdf/$SMOKE_EXE/ directory.

If needed, update the files

to have the compiler options for your operating system. See the instructions above for the platform file updates to determine whether you need to do this. All of the same cases available in the platform file are also available in these three files.

After the appropriate libraries and compile options have been installed, you can source an Assigns file to ensure that your system is configured properly.

cd $SMK_HOME/subsys/smoke/assigns

source ASSIGNS.nctox.cmaq.cb4p25.us12-nc

At this point, you may need to create some symbolic links that are normally created by the smoke_install.csh script. If your system was not in the platform script, then these links would not have been created. You can use the following shell script to create the symbolic links.

#!/bin/csh

cd $SMKROOT/src
foreach dir ( biog cntlmat emmod emqa emutil grdmat inc lib \
              mo6 mobile point smkinven smkmerge spcmat temporal )
    cd $dir
    ln -s ../../scripts/make/Makeit ./
    cd ..
end

cd $ARDAT
echo "#LIST" > arinv.stationary.lst
ls $ARDAT/arinv.nonpoint.nti99_NC.new.txt >> arinv.stationary.lst
ls $ARDAT/arinv.stationary.nei96_NC.ida.txt >> arinv.stationary.lst

cd $MBDAT
echo "#LIST" > mbinv.lst
ls $MBDAT/mbinv.nei99_NC.ida.txt >> mbinv.lst
ln -s mcref.nctox.txt mcref.nctox_18.txt
ln -s mvref.nctox.txt mvref.nctox_18.txt

cd $INVDIR/nonroad
echo "#LIST" > arinv.nonroad.lst
ls $INVDIR/nonroad/arinv.nonroad.n* >> arinv.nonroad.lst

cd $PTDAT
echo "#LIST" > ptinv.lst
ls $PTDAT/ptinv.n* >> ptinv.lst

You should now be ready to compile the SMOKE programs. Change directories to $SCRIPTS/make/.

Optionally edit the header of the Makeall file to turn off building one or more libraries needed for SMOKE (libfileset, libedsstools, libsmoke, or libmo6). You can turn off these options only if these libraries have been previously compiled for your system.

At the UNIX prompt, type:

Makeall

The only errors that are acceptable when you use this script are errors after the /bin/rm commands. The /bin/rm commands will fail if there are no object files (*.o files) in your SMOKE source code directories. This will be the case if you have not previously compiled SMOKE.

After running the Makeall script, you should have the following executables in the $SMK_BIN directory:

aggwndw, beld3to2, bluesky2inv, cemscan, cntlmat, elevpoint, emisfac, extractida, grdmat, grwinven, invsplit, laypoint, mbsetup, metcombine, metscan, mrgelev, mrggrid, normbeis3, pktreduc, premobl, rawbio, smk2emis, smkinven, smkmerge, smkreport, spcmat, surgtool, temporal, tmpbeis3, tmpbio, uam2ncf

If you would like to compile individual programs, you can do so using the Makeit command in the appropriate source code directory. For example, to make the Smkinven program, type the following:

cd $IV_SRC

Makeit smkinven

Once you have compiled the SMOKE programs, you can run the SMOKE example scripts following the instructions in Section 4.4, “Running the nctox test case”.